Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs113855394 | chr14:59859472 | T/C | 0.00023 | 210 | 14.83 | 19.4 | 6.63 | KM Plot |
KIRP | rs113869004 | chr14:59918731 | C/T | 0.000127 | 211 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs113878281 | chr14:59917494 | G/A | 0.000115 | 212 | 16.43 | 17.03 | 6.63 | KM Plot |
KIRP | rs113903767 | chr6:36789049 | T/C | 6.91E-7 | 212 | 17.02 | 14.87 | 8.73 | KM Plot |
KIRP | rs113921434 | chr14:59936059 | T/A | 3.85E-5 | 212 | 16.47 | 15.07 | 6.63 | KM Plot |
KIRP | rs114092081 | chr11:34990982 | C/T | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |
KIRP | rs114167369 | chr1:198109486 | G/A | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
KIRP | rs114192835 | chr1:198126017 | A/C | 1.35E-6 | 213 | 14.83 | 31.97 | 13.65 | KM Plot |
KIRP | rs11435482 | chr6:26328622 | T/TA | 6.31E-5 | 207 | 17.07 | 13.6 | 6.93 | KM Plot |
KIRP | rs114562368 | chr1:45899178 | G/A | 4.61E-13 | 214 | 15.2 | 17 | 9 | KM Plot |
KIRP | rs114847303 | chr11:42227314 | G/A | 2.27E-8 | 214 | 15.88 | 15.48 | 10.6 | KM Plot |
KIRP | rs11500298 | chr11:34924316 | T/C | 3.36E-12 | 212 | 16.45 | 17 | 5.57 | KM Plot |
KIRP | rs115083730 | chr19:42544877 | G/A | 0.000314 | 214 | 15.1 | 17 | 11.2 | KM Plot |
KIRP | rs11541237 | chr10:75530962 | C/T | 0 | 213 | 16.5 | 15.07 | 2.47 | KM Plot |
KIRP | rs11550062 | chr17:80710097 | G/T | 9.04E-5 | 210 | 15.33 | 17.2 | 15.15 | KM Plot |